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Table 1 Significantly enriched pathways of genes differentially expressed in subclones SP and RP compared to the parental CAL-33 cells

From: Transcriptomic analyses of the radiation response in head and neck squamous cell carcinoma subclones with different radiation sensitivity: time-course gene expression profiles and gene association networks

CAL-33 SP vs parental

Common signalling pathways

CAL-33 RP vs parental

Transmembrane transport of small molecules

Signaling by VEGF

Nonhomologous end-joining (NHEJ)

GPCR ligand binding

Extracellular matrix organization

Homologous DNA pairing and strand exchange

Signaling by Rho GTPases

RNA polymerase III transcription initiation

CD28 dependent PI3K/Akt signaling

 

Interferon signaling

NOTCH1 intracellular domain regulates transcription

 

Signaling by interleukins

 
 

Senescence-associated secretory phenotype (SASP)

 
 

NOD1/2 signaling pathway

 
 

TNFR1-induced NFkB signaling pathway

 
 

Toll-like receptors cascades

 
 

Death receptor signaling

 
 

MAPK1/MAPK3 signaling

 
  1. Pathways common (middle) and specific to the radiosensitive (left) or radioresistant (right) phenotype are shown. The corresponding genes and their direction of regulation (up/down) are listed in Additional file 4: Table S3 and Additional file 6: Table S5